PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0209s0048.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 582aa    MW: 62245.5 Da    PI: 6.7867
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0209s0048.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.7e-30347405259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+++r+aed +++++tYeg+Hnh+
  Kalax.0209s0048.1.p 347 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQIQRCAEDRTILVTTYEGNHNHP 405
                          7*********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-32331407IPR003657WRKY domain
SuperFamilySSF1182903.4E-27339407IPR003657WRKY domain
PROSITE profilePS5081129.356341407IPR003657WRKY domain
SMARTSM007741.2E-35346406IPR003657WRKY domain
PfamPF031061.1E-25348405IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 582 aa     Download sequence    Send to blast
MESTMRSEWK VASNVVVDPD RYYSSSFFSN KPTVLNSLPI LTNYRAGGGD MFPIRRCGDL  60
VMEKPPAADR DCGGGDDDPD ESVKRVDVVD FFAERRFDDR SQSRDGCGLP VKRESSHGEA  120
AAAPLRELDV NTGLNLVMAN RGSDESDDGS SASDSKRAKI ELSQLQMELG RMTAENVKLK  180
EMLSHVSNNY EALQLHMMSL TKQQQQSSLQ PENGPEPKNG DHEKPAEKKH GVNGLIEPRR  240
FLDIGRSGSG AETDEVLSHS SSEDGTQSGS PPAAGKRPRG DSKKDNKMVA VREDSPNSDT  300
QVWTADKPGN NTNPNTAKAS IDQQSAEATM RKARVSVRAR SEAPMISDGC QWRKYGQKMA  360
KGNPCPRAYY RCTMAVGCPV RKQIQRCAED RTILVTTYEG NHNHPLPPAA MSMASTTTAA  420
AAMLLSGSMS SADGLMNPNF LARAMLPACS SSMATISASA PFPTVTLDLT HTASPGPLQL  480
QRPHPQAQFP GPIGPQILTS LPFITNALPQ IFTQALHNQS KFSGLQVSQD DSINAVTAAI  540
AADPSFTAAV AATISSIISG GGANHSSNNN NGSSITSIPP Q*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21333409176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002263115.11e-171PREDICTED: probable WRKY transcription factor 31
SwissprotQ9XEC31e-134WRK42_ARATH; Probable WRKY transcription factor 42
TrEMBLF6H7H01e-171F6H7H0_VITVI; Putative uncharacterized protein
STRINGVIT_10s0116g01200.t011e-170(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-108WRKY family protein